Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015933232.1_cds_XP_016479618.1_71142
CDS Infomation

[gene=LOC107800875] [db_xref=GeneID:107800875] [protein=IRK-interacting protein-like isoform X2] [protein_id=XP_016479618.1] [location=complement(18089..19459)] [gbkey=CDS]
Sequence

ATGGATTCTGTAAATCGGTCTGCTGTGACCCCGAGTAAGAGCAAATTGGCTCGCACTTTT
GCTAAGGTCCTGCACATTAGAGCTCTGACAGGAGGAACTCAGAAGCACAAATTCACTGAA
AATGTCAAGGATGATGCAGTAAAGAATGATGTAGCGAAGAGCGAGCTACTCAAGAAAGCA
CAGTTCAAATCCTTTGATGATGAAGATGAAAAGCTGAGACAGAAAGCAGCTACAGAAGCT
TTTCTTGCCAAGCTGTTTGCAAACATCTCAGCTGTTAAAGCGGCATATGCCCAATTGCAG
TTTGCTCAGTCTCCGTATAACCCTGATGGGATTCAATGTGCTGATGAGTTGGTGGTATCC
GAGCTGAAAAACTTGTCTGAATTGAAACAGTGCTTTGTGAAGAAGCAGTTGGATGAGTAT
TCCCCAGAAACCACTCAGATTTTGGCTGAAATTCAGGAGCAGAAAAGCGTTTTAAAGACG
TATGATATCATGGGAAAGAAGTTGGATTCACAGCTCAAACTCAAGGAATCAGAAATTATG
TTTCTCAGAGAGACATTGATCGAGGCTAATAAAGAAAACAAGCTGCTTGAGAAAAGGTTG
AACTCCAGTGGACCGGTGTCTGCTCTGGACAATCTTCACTTTTCAAGCTTGAGCCCTAGC
CATTTTATCATGTTCCTCCGGCAGACAATTAGGTCGATTCGAAGTTTTGTTAGGTTGCTC
AGCAAGGAGATGTTAGCTGCTGGGTGGAACTTAGATGCTGCGGCCAGTTCCATCGAACCC
GATATAGAGTTCCTGAAAGCAAATGACATATGTTATGCTTTTGAATCATTCGTTTGCCGG
GAGATGTTTGATGGTTTCAATTATCCTAACTTTTCAATCTCAACTGAGCCCCTGCCCGAG
CAAAAGAAGAGGCCAAGGTTGTTTTTCGACAGATTCATGGAGCTAAGATCTGTTAAACCA
GCAGATTACTTAGCTTGGAAACCCAAATCAACATTTGCAAGATTCTGTCGTGCTAAGTAC
TTGAAACTAATCCACCCCAAGATTGAAGAGTCCATTTTTGGCAACGTGAATCAAAGAAAC
ATACTCAATTCGGCTGAGTATCCGGAGTCAACATTCTTCTCGACATTTAGTGAAATGGCC
AAGCGCATTTGGTTGCTACACTGTCTGGCTTTCTCCTTCGATCCCGTAGCTGCAGTCTTT
CAAGTTAGCAGAGGGTGTCGGTTTTCGGATGTTTACATGGAGAGTGTGAACGAAGAGGCA
TTCTTGTCATGGGACGGATCACCTGAAACTGAACCGACTGTAGGTTTCACGGTGGTTCCA
GGGTTCAAGATTGGTAAAACTGTTGTTCAGTGTCAAGTTTACCTATGTTGA

Peptide Sequence

PEP ID

XP_016479618.1
PEP Infomation

PREDICTED: IRK-interacting protein-like isoform X2 [Nicotiana tabacum]
Sequence

MDSVNRSAVTPSKSKLARTFAKVLHIRALTGGTQKHKFTENVKDDAVKNDVAKSELLKKA
QFKSFDDEDEKLRQKAATEAFLAKLFANISAVKAAYAQLQFAQSPYNPDGIQCADELVVS
ELKNLSELKQCFVKKQLDEYSPETTQILAEIQEQKSVLKTYDIMGKKLDSQLKLKESEIM
FLRETLIEANKENKLLEKRLNSSGPVSALDNLHFSSLSPSHFIMFLRQTIRSIRSFVRLL
SKEMLAAGWNLDAAASSIEPDIEFLKANDICYAFESFVCREMFDGFNYPNFSISTEPLPE
QKKRPRLFFDRFMELRSVKPADYLAWKPKSTFARFCRAKYLKLIHPKIEESIFGNVNQRN
ILNSAEYPESTFFSTFSEMAKRIWLLHCLAFSFDPVAAVFQVSRGCRFSDVYMESVNEEA
FLSWDGSPETEPTVGFTVVPGFKIGKTVVQCQVYLC

Transcript Sequence

Gene sequence data has not been registered.